Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_687: 9055 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1646516 to 1647919 9055 mRNA_688: 9056 - Hypothetical Protein, at 1648310 to 1648900 9056 mRNA_689: 9057 - HMMPfam-Eisosome component PIL1-PF13805, at 1649423 to 1652202 9057 mRNA_690: 9058 - HMMPfam-Tat binding protein 1(TBP-1)-interacting protein (TBPIP)-PF07106, at 1652367 to 1653596 9058 mRNA_691: 9059 - BLAST gliotoxin biosynthesis protein GliK [Marssonina b..., at 1654187 to 1655230 9059
Group Condition mRNA_687 mRNA_688 mRNA_689 mRNA_690 mRNA_691
9055
9056
9057
9058
9059
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -1.4 -0.9   -1.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -1.1 -0.4   0.1
auxotrophy YNB Glucose -0.3 -0.6 -0.1   -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.3 0.1   -0.3
ypd buoyancy 40 hrs High Buoyancy 0.4 -0.1 -0.8   -0.4
auxotrophy Dropout Complete -0.3 -0.4 0.2   -0.3
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.1 -0.5   -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.1 -0.6   -0.2
auxotrophy YNB Glucose 75mM Methionine 0.1 0.1 -0.5   -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4 0.5 -0.6   -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.2 -0.5   0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.1   -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.5 -0.5   0.4
growth on ricinoleic acid YNB Glucose 0.0 -0.3 -0.3   0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.4 -0.4   -0.0
growth on oleic acid YNB Glucose 0.0 -0.3 0.1   0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.3 0.2   -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.7 -0.1   -0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.2 -0.3   0.7
growth on oleic acid YNB Oleic Acid 0.0 0.6 -0.1   0.2
growth on ypd YPD 0.8 0.7 0.5   0.3
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