Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_685: 9053 - K10577 UBE2I, UBC9 ubiquitin-conjugating enzyme E2 I, at 1643444 to 1644500 9053 mRNA_686: 9054 - K06867 K06867 uncharacterized protein, at 1645014 to 1645916 9054 mRNA_687: 9055 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1646516 to 1647919 9055 mRNA_688: 9056 - Hypothetical Protein, at 1648310 to 1648900 9056 mRNA_689: 9057 - HMMPfam-Eisosome component PIL1-PF13805, at 1649423 to 1652202 9057
Group Condition mRNA_685 mRNA_686 mRNA_687 mRNA_688 mRNA_689
9053
9054
9055
9056
9057
ypd buoyancy 40 hrs No Buoyancy Separation   -0.4 0.1 -1.4 -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.0 0.1 -1.1 -0.4
auxotrophy YNB Glucose   0.1 -0.3 -0.6 -0.1
growth on ricinoleic acid YNB Glucose   -0.2 0.0 -0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid   0.1 0.2 -0.5 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.2 0.2 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.1 0.2 -0.2 -0.5
growth on oleic acid YNB Glucose   -0.3 0.0 -0.3 0.1
auxotrophy Dropout Complete   0.1 -0.3 -0.4 0.2
ypd buoyancy 40 hrs High Buoyancy   0.1 0.4 -0.1 -0.8
auxotrophy YNB Glucose 75mM Arginine   0.0 -0.1 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy   0.0 0.1 -0.1 -0.5
facs on lipid accumulation Sorted No BODIPY Gate   0.1 -0.4 0.5 -0.6
facs on lipid accumulation Sorted High BODIPY Gate   0.4 -0.5 -0.3 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.1 -0.2 0.4 -0.4
auxotrophy YNB Glucose 75mM Methionine   0.1 0.1 0.1 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid   0.1 0.3 -0.2 -0.3
growth on oleic acid YNB Oleic Acid   0.1 0.0 0.6 -0.1
ypd buoyancy 40 hrs Median Buoyancy   0.2 0.2 0.7 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate   0.6 -0.1 0.3 0.2
growth on ypd YPD   -0.2 0.8 0.7 0.5
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