Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_662: 9030 - HMMPfam-EF-hand domain pair-PF13499,ProSitePatterns-EF-hand calcium-binding domain.-PS00018,ProSiteProfiles-EF-hand calcium-binding domain profile.-PS50222,SUPERFAMILY--SSF47473, at 1593854 to 1595354 9030 mRNA_663: 9031 - SUPERFAMILY--SSF103196, at 1595693 to 1596287 9031 mRNA_664: 9032 - HMMPfam-2OG-Fe(II) oxygenase superfamily-PF13532,SUPERFAMILY--SSF51197, at 1596651 to 1602461 9032 mRNA_665: 9033 - K08853 AAK AP2-associated kinase, at 1602722 to 1607021 9033 mRNA_666: 9034 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 1607082 to 1608088 9034
Group Condition mRNA_662 mRNA_663 mRNA_664 mRNA_665 mRNA_666
9030
9031
9032
9033
9034
auxotrophy Dropout Complete 0.4   -0.1 -1.0 -1.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.0   -0.3 -2.0 0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.5   -0.4 -0.8 -0.8
auxotrophy YNB Glucose 75mM Arginine 0.2   0.0 -0.9 -0.7
facs on lipid accumulation Sorted No BODIPY Gate 0.0   -0.2 -1.3 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0   -0.1 -0.4 -0.5
auxotrophy YNB Glucose 75mM Methionine 0.5   0.0 -1.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2   0.1 -0.8 -0.1
auxotrophy YNB Glucose 0.6   0.1 -1.1 -0.5
growth on oleic acid YNB Glucose 0.2   0.1 -0.8 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.0   -0.2 -1.0 0.9
growth on ricinoleic acid YNB Glucose 0.5   -0.0 -0.9 0.3
growth on oleic acid YNB Oleic Acid 0.3   -0.0 -0.5 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3   -0.0 -0.1 -0.1
growth on ypd YPD 0.2   0.2 -0.3 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.4   0.3 -0.8 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5   0.1 -0.5 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2   -0.0 0.1 0.1
ypd buoyancy 40 hrs High Buoyancy 0.6   -0.1 -0.0 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.6   0.0 -0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.4   0.0 0.0 0.2
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