Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_658: 9026 - K11842 USP12_46 ubiquitin carboxyl-terminal hydrolase 12/46, at 1582367 to 1585803 9026 mRNA_659: 9027 - Hypothetical Protein, at 1586491 to 1589993 9027 mRNA_660: 9028 - K13289 CTSA, CPY cathepsin A (carboxypeptidase C), at 1590128 to 1592290 9028 mRNA_661: 9029 - Hypothetical Protein, at 1593045 to 1593501 9029 mRNA_662: 9030 - HMMPfam-EF-hand domain pair-PF13499,ProSitePatterns-EF-hand calcium-binding domain.-PS00018,ProSiteProfiles-EF-hand calcium-binding domain profile.-PS50222,SUPERFAMILY--SSF47473, at 1593854 to 1595354 9030
Group Condition mRNA_658 mRNA_659 mRNA_660 mRNA_661 mRNA_662
9026
9027
9028
9029
9030
buoyancy on lipid accumulation 40 hrs Low Buoyancy -2.0 -0.3 -0.2 0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.1 0.1 0.3 0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.0 -0.4 0.2 0.0
growth on ricinoleic acid YNB Glucose -0.5 0.2 -0.2 0.1 0.5
auxotrophy Dropout Complete -0.5 0.3 -0.1 0.1 0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.3 0.9 0.0 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 0.3 0.1 -0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.1 -0.6 0.2 0.2
auxotrophy YNB Glucose 75mM Arginine -0.6 0.3 0.2 0.1 0.2
growth on ypd YPD -0.2 0.4 -0.1 -0.0 0.2
auxotrophy YNB Glucose 75mM Methionine -0.5 0.3 0.3 -0.0 0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 0.4 -0.1 0.6
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.3 0.7 -0.0 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.1 -0.1 0.1 0.5
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 0.3 -0.5 0.1 0.4
growth on oleic acid YNB Glucose -0.1 0.3 0.1 0.3 0.2
auxotrophy YNB Glucose -0.3 0.4 0.1 0.1 0.6
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 0.8 -0.1 0.6
growth on oleic acid YNB Oleic Acid 0.5 0.1 0.4 0.2 0.3
facs on lipid accumulation Sorted High BODIPY Gate 1.0 0.2 -0.2 0.3 0.5
facs on lipid accumulation Sorted Low BODIPY Gate 1.8 0.2 -0.1 0.0 0.0
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