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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_656: 9024 - Hypothetical Protein, at 1579161 to 1580144
9024
mRNA_657: 9025 - Hypothetical Protein, at 1581260 to 1582108
9025
mRNA_658: 9026 - K11842 USP12_46 ubiquitin carboxyl-terminal hydrolase 12/46, at 1582367 to 1585803
9026
mRNA_659: 9027 - Hypothetical Protein, at 1586491 to 1589993
9027
mRNA_660: 9028 - K13289 CTSA, CPY cathepsin A (carboxypeptidase C), at 1590128 to 1592290
9028
Group
Condition
mRNA_656
mRNA_657
mRNA_658
mRNA_659
mRNA_660
9024
9025
9026
9027
9028
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.9
-2.0
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.4
-0.8
-1.1
0.1
0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-1.3
-0.4
-0.3
0.9
growth on ricinoleic acid
YNB Glucose
0.1
-0.4
-0.5
0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
0.3
0.2
-0.0
-0.4
auxotrophy
YNB Glucose
0.1
-0.4
-0.3
0.4
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.2
0.0
0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.3
-0.5
0.3
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.1
-0.1
-0.2
0.4
auxotrophy
Dropout Complete
0.1
0.4
-0.5
0.3
-0.1
growth on ypd
YPD
-0.3
0.4
-0.2
0.4
-0.1
growth on oleic acid
YNB Glucose
0.1
-0.1
-0.1
0.3
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.1
-0.2
-0.3
0.7
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.6
-0.6
0.3
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.3
-0.5
0.3
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
0.2
0.3
0.1
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.5
0.5
0.3
-0.5
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.1
-0.1
-0.0
0.8
growth on oleic acid
YNB Oleic Acid
0.1
0.2
0.5
0.1
0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
0.8
1.0
0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
0.9
1.8
0.2
-0.1
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