Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_656: 9024 - Hypothetical Protein, at 1579161 to 1580144 9024 mRNA_657: 9025 - Hypothetical Protein, at 1581260 to 1582108 9025 mRNA_658: 9026 - K11842 USP12_46 ubiquitin carboxyl-terminal hydrolase 12/46, at 1582367 to 1585803 9026 mRNA_659: 9027 - Hypothetical Protein, at 1586491 to 1589993 9027 mRNA_660: 9028 - K13289 CTSA, CPY cathepsin A (carboxypeptidase C), at 1590128 to 1592290 9028
Group Condition mRNA_656 mRNA_657 mRNA_658 mRNA_659 mRNA_660
9024
9025
9026
9027
9028
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.9 -2.0 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 -0.8 -1.1 0.1 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -1.3 -0.4 -0.3 0.9
growth on ricinoleic acid YNB Glucose 0.1 -0.4 -0.5 0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 0.3 0.2 -0.0 -0.4
auxotrophy YNB Glucose 0.1 -0.4 -0.3 0.4 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.2 0.0 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.3 -0.5 0.3 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.1 -0.1 -0.2 0.4
auxotrophy Dropout Complete 0.1 0.4 -0.5 0.3 -0.1
growth on ypd YPD -0.3 0.4 -0.2 0.4 -0.1
growth on oleic acid YNB Glucose 0.1 -0.1 -0.1 0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.1 -0.2 -0.3 0.7
auxotrophy YNB Glucose 75mM Arginine -0.0 0.6 -0.6 0.3 0.2
auxotrophy YNB Glucose 75mM Methionine 0.1 0.3 -0.5 0.3 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 0.2 0.3 0.1 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.5 0.5 0.3 -0.5
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1 -0.1 -0.0 0.8
growth on oleic acid YNB Oleic Acid 0.1 0.2 0.5 0.1 0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.8 1.0 0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.9 1.8 0.2 -0.1
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