Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
500 nt
mRNA_654: 9022 - K14809 DDX55, SPB4 ATP-dependent RNA helicase DDX55/SPB4, at 1573300 to 1575930
9022
mRNA_655: 9023 - K11246 SHO1 SHO1 osmosensor, at 1576214 to 1578020
9023
mRNA_656: 9024 - Hypothetical Protein, at 1579161 to 1580144
9024
mRNA_657: 9025 - Hypothetical Protein, at 1581260 to 1582108
9025
mRNA_658: 9026 - K11842 USP12_46 ubiquitin carboxyl-terminal hydrolase 12/46, at 1582367 to 1585803
9026
Group
Condition
mRNA_654
mRNA_655
mRNA_656
mRNA_657
mRNA_658
9022
9023
9024
9025
9026
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.2
-0.9
-2.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
0.2
-1.3
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.4
-0.8
-1.1
growth on ricinoleic acid
YNB Glucose
0.1
0.1
-0.4
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.7
0.1
-0.1
-0.1
auxotrophy
YNB Glucose
0.0
0.1
-0.4
-0.3
growth on oleic acid
YNB Glucose
-0.3
0.1
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.2
-0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.2
-0.2
0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.1
0.3
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.3
-0.3
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.2
-0.1
-0.1
auxotrophy
Dropout Complete
-0.1
0.1
0.4
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.0
0.6
-0.6
growth on ypd
YPD
0.1
-0.3
0.4
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.4
0.3
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.1
0.5
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.5
0.2
0.3
growth on oleic acid
YNB Oleic Acid
0.6
0.1
0.2
0.5
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
0.2
0.8
1.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.1
0.9
1.8
remove
mRNA_654
plot
remove
mRNA_655
plot
remove
mRNA_656
remove
mRNA_657
plot
remove
mRNA_658
plot