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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_648: 9016 - K03424 tatD TatD DNase family protein, at 1557558 to 1558767
9016
mRNA_649: 9017 - K15192 BTAF1, MOT1 TATA-binding protein-associated factor, at 1558936 to 1565576
9017
mRNA_650: 9018 - KOG0603 Ribosomal protein S6 kinase, at 1565768 to 1568049
9018
mRNA_651: 9019 - Hypothetical Protein, at 1568205 to 1569102
9019
mRNA_652: 9020 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 1570188 to 1571223
9020
Group
Condition
mRNA_648
mRNA_649
mRNA_650
mRNA_651
mRNA_652
9016
9017
9018
9019
9020
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.2
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.4
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.4
0.0
growth on oleic acid
YNB Glucose
0.3
-0.4
-0.5
growth on oleic acid
YNB Oleic Acid
0.0
-0.2
-0.3
growth on ypd
YPD
0.2
-0.2
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.0
-0.1
growth on ricinoleic acid
YNB Glucose
0.6
-0.6
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
0.0
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
0.1
-0.2
auxotrophy
Dropout Complete
0.4
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.2
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.4
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.2
0.8
ypd buoyancy
40 hrs High Buoyancy
0.1
0.3
-0.0
auxotrophy
YNB Glucose
0.5
-0.2
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.0
0.5
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.0
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.2
0.3
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