Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_642: 9010 - HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1544667 to 1546033 9010 mRNA_643: 9011 - K15117 SLC25A34_35, OAC1 solute carrier family 25, member 34/35, at 1546203 to 1548129 9011 mRNA_644: 9012 - KOG3020 TatD-related DNase, at 1548576 to 1549928 9012 mRNA_645: 9013 - KOG3104 Mod5 protein sorting/negative effector of RNA Pol III synthesis, at 1550382 to 1551455 9013 mRNA_646: 9014 - K09885 AQPF aquaporin rerated protein, other eukaryote, at 1552967 to 1555102 9014
Group Condition mRNA_642 mRNA_643 mRNA_644 mRNA_645 mRNA_646
9010
9011
9012
9013
9014
ypd buoyancy 40 hrs No Buoyancy Separation   -0.3 -0.2 -2.8 0.2
facs on lipid accumulation Sorted No BODIPY Gate   -0.2 0.1 -1.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate   -0.2 -0.1 -0.8 -0.1
ypd buoyancy 40 hrs High Buoyancy   -0.4 0.0 -0.4 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.3 -0.3 0.3 -0.3
auxotrophy Dropout Complete   0.1 -0.1 -0.1 -0.3
auxotrophy YNB Glucose   0.3 -0.1 -0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine   0.2 -0.0 0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine   0.3 0.1 -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy   -0.4 0.0 0.6 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid   -0.5 -0.1 0.9 -0.2
growth on oleic acid YNB Oleic Acid   -0.0 -0.1 0.7 -0.4
ypd buoyancy 40 hrs Low Buoyancy   0.0 -0.0 0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate   -0.0 0.4 0.2 -0.2
growth on ricinoleic acid YNB Glucose   -0.1 -0.2 0.9 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.2 -0.2 1.1 -0.0
growth on oleic acid YNB Glucose   0.4 -0.1 0.6 -0.3
growth on ypd YPD   -0.1 -0.1 1.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.2 -0.4 1.4 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.3 -0.1 1.7 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.4 -0.3 1.9 -0.1
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