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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_638: 9006 - K02947 RP-S10e, RPS10 small subunit ribosomal protein S10e, at 1533368 to 1534142
9006
mRNA_639: 9007 - K18027 PTPN3, PTPH1 tyrosine-protein phosphatase non-receptor type 3, at 1534937 to 1536294
9007
mRNA_640: 9008 - HMMPfam-UV radiation resistance protein and autophagy-related subunit 14-PF10186, at 1536476 to 1538269
9008
mRNA_641: 9009 - K08333 PIK3R4, VPS15 phosphoinositide-3-kinase, regulatory subunit 4, at 1538392 to 1544328
9009
mRNA_642: 9010 - HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1544667 to 1546033
9010
Group
Condition
mRNA_638
mRNA_639
mRNA_640
mRNA_641
mRNA_642
9006
9007
9008
9009
9010
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-4.0
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
-2.0
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-1.4
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.5
-0.5
growth on ypd
YPD
0.1
-0.9
0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.7
0.2
auxotrophy
Dropout Complete
-0.1
-0.4
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.3
0.2
auxotrophy
YNB Glucose
-0.1
-0.3
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.0
0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
0.5
-0.1
growth on oleic acid
YNB Glucose
-0.0
0.2
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.7
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
1.0
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.7
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.7
0.3
growth on oleic acid
YNB Oleic Acid
-0.0
0.3
0.6
growth on ricinoleic acid
YNB Glucose
-0.0
0.6
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.5
0.4
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.8
0.1
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