Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_638: 9006 - K02947 RP-S10e, RPS10 small subunit ribosomal protein S10e, at 1533368 to 1534142 9006 mRNA_639: 9007 - K18027 PTPN3, PTPH1 tyrosine-protein phosphatase non-receptor type 3, at 1534937 to 1536294 9007 mRNA_640: 9008 - HMMPfam-UV radiation resistance protein and autophagy-related subunit 14-PF10186, at 1536476 to 1538269 9008 mRNA_641: 9009 - K08333 PIK3R4, VPS15 phosphoinositide-3-kinase, regulatory subunit 4, at 1538392 to 1544328 9009 mRNA_642: 9010 - HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1544667 to 1546033 9010
Group Condition mRNA_638 mRNA_639 mRNA_640 mRNA_641 mRNA_642
9006
9007
9008
9009
9010
facs on lipid accumulation Sorted High BODIPY Gate   0.2 -4.0 -0.0  
facs on lipid accumulation Sorted No BODIPY Gate   0.3 -2.0 -0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.2 -1.4 -0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.3 -0.5 -0.5  
growth on ypd YPD   0.1 -0.9 0.3  
auxotrophy YNB Glucose 75mM Methionine   -0.0 -0.7 0.2  
auxotrophy Dropout Complete   -0.1 -0.4 0.1  
auxotrophy YNB Glucose 75mM Arginine   -0.1 -0.3 0.2  
auxotrophy YNB Glucose   -0.1 -0.3 0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.2 0.3 -0.1  
ypd buoyancy 40 hrs High Buoyancy   -0.0 0.0 0.3  
ypd buoyancy 40 hrs No Buoyancy Separation   -0.0 0.5 -0.1  
growth on oleic acid YNB Glucose   -0.0 0.2 0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.2 0.7 -0.0  
facs on lipid accumulation Sorted Low BODIPY Gate   0.3 1.0 -0.7  
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.2 0.7 -0.1  
growth on ricinoleic acid YNB Ricinoleic Acid   -0.2 0.7 0.3  
growth on oleic acid YNB Oleic Acid   -0.0 0.3 0.6  
growth on ricinoleic acid YNB Glucose   -0.0 0.6 0.3  
ypd buoyancy 40 hrs Median Buoyancy   0.1 0.5 0.4  
ypd buoyancy 40 hrs Low Buoyancy   0.1 0.8 0.1  
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