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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_622: 8990 - K18156 ATP23, XRCC6BP1 mitochondrial inner membrane protease ATP23, at 1493760 to 1494779
8990
mRNA_623: 8991 - KOG3158 HSP90 co-chaperone p23, at 1495078 to 1496047
8991
mRNA_624: 8992 - K13886 CORO1B_1C_6 coronin-1B/1C/6, at 1496252 to 1498125
8992
mRNA_625: 8993 - K13162 PCBP2_3_4 poly(rC)-binding protein 2/3/4, at 1498815 to 1500137
8993
mRNA_626: 8994 - K19423 epsE glycosyltransferase EpsE, at 1500844 to 1503706
8994
Group
Condition
mRNA_622
mRNA_623
mRNA_624
mRNA_625
mRNA_626
8990
8991
8992
8993
8994
buoyancy on lipid accumulation
40 hrs High Buoyancy
-1.8
0.3
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
0.1
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.8
0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.4
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
0.7
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
0.1
-0.7
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.7
0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
0.4
-1.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.4
-0.8
ypd buoyancy
40 hrs Low Buoyancy
-0.3
0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.5
0.3
0.2
growth on oleic acid
YNB Oleic Acid
-0.9
1.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.3
0.2
auxotrophy
Dropout Complete
0.3
0.2
-0.1
auxotrophy
YNB Glucose
0.0
0.2
0.4
growth on oleic acid
YNB Glucose
-0.3
1.0
0.2
growth on ypd
YPD
0.4
0.3
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.9
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
1.4
0.3
growth on ricinoleic acid
YNB Glucose
0.2
1.4
0.5
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