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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_619: 8987 - K08486 STX1B_2_3 syntaxin 1B/2/3, at 1486682 to 1488921
8987
mRNA_620: 8988 - K17742 SOU1 sorbose reductase, at 1489486 to 1490787
8988
mRNA_621: 8989 - K14405 FIP1L1, FIP1 pre-mRNA 3'-end-processing factor FIP1, at 1492211 to 1493623
8989
mRNA_622: 8990 - K18156 ATP23, XRCC6BP1 mitochondrial inner membrane protease ATP23, at 1493760 to 1494779
8990
mRNA_623: 8991 - KOG3158 HSP90 co-chaperone p23, at 1495078 to 1496047
8991
Group
Condition
mRNA_619
mRNA_620
mRNA_621
mRNA_622
mRNA_623
8987
8988
8989
8990
8991
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.3
-1.8
growth on oleic acid
YNB Oleic Acid
-0.1
0.0
-0.9
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.0
-0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.0
-0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.1
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.1
-0.7
ypd buoyancy
40 hrs Low Buoyancy
-0.2
0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.1
-0.5
growth on oleic acid
YNB Glucose
0.2
-0.0
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.6
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.4
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
-0.0
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
0.6
-0.2
growth on ricinoleic acid
YNB Glucose
0.2
0.1
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.4
0.3
-0.1
auxotrophy
YNB Glucose
0.2
0.3
0.0
growth on ypd
YPD
-0.2
0.6
0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
0.0
0.4
auxotrophy
Dropout Complete
0.3
0.3
0.3
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