Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_619: 8987 - K08486 STX1B_2_3 syntaxin 1B/2/3, at 1486682 to 1488921 8987 mRNA_620: 8988 - K17742 SOU1 sorbose reductase, at 1489486 to 1490787 8988 mRNA_621: 8989 - K14405 FIP1L1, FIP1 pre-mRNA 3'-end-processing factor FIP1, at 1492211 to 1493623 8989 mRNA_622: 8990 - K18156 ATP23, XRCC6BP1 mitochondrial inner membrane protease ATP23, at 1493760 to 1494779 8990 mRNA_623: 8991 - KOG3158 HSP90 co-chaperone p23, at 1495078 to 1496047 8991
Group Condition mRNA_619 mRNA_620 mRNA_621 mRNA_622 mRNA_623
8987
8988
8989
8990
8991
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.3     -1.8
growth on oleic acid YNB Oleic Acid -0.1 0.0     -0.9
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.0     -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.0     -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.1     -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.1     -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.2     -0.3
auxotrophy YNB Glucose 75mM Methionine 0.2 0.1     -0.5
growth on oleic acid YNB Glucose 0.2 -0.0     -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.0     -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.3     -0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 0.6     -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.4     -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.0     0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.6     -0.2
growth on ricinoleic acid YNB Glucose 0.2 0.1     0.2
auxotrophy YNB Glucose 75mM Arginine 0.4 0.3     -0.1
auxotrophy YNB Glucose 0.2 0.3     0.0
growth on ypd YPD -0.2 0.6     0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 0.0     0.4
auxotrophy Dropout Complete 0.3 0.3     0.3
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