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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_614: 8982 - K06875 PDCD5, TFAR19 programmed cell death protein 5, at 1477879 to 1478544
8982
mRNA_615: 8983 - HMMPfam-Haloacid dehalogenase-like hydrolase-PF13419,SUPERFAMILY--SSF56784, at 1478785 to 1480102
8983
mRNA_616: 8984 - HMMPfam-Hsp70 protein-PF00012,SUPERFAMILY--SSF100934, at 1480593 to 1481006
8984
mRNA_617: 8985 - Hypothetical Protein, at 1482185 to 1482679
8985
mRNA_618: 8986 - HMMPfam-PX domain-PF00787,ProSiteProfiles-PX domain profile.-PS50195,SUPERFAMILY--SSF64268, at 1482898 to 1485797
8986
Group
Condition
mRNA_614
mRNA_615
mRNA_616
mRNA_617
mRNA_618
8982
8983
8984
8985
8986
growth on ricinoleic acid
YNB Glucose
-0.7
0.0
0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.2
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
0.0
0.1
growth on ypd
YPD
0.5
-0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
0.4
-0.2
growth on oleic acid
YNB Glucose
-0.3
-0.0
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.1
0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
0.1
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
-0.1
0.1
growth on oleic acid
YNB Oleic Acid
-0.4
0.4
0.7
auxotrophy
YNB Glucose
-0.1
0.5
0.4
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.5
0.4
auxotrophy
Dropout Complete
0.2
0.5
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.5
0.4
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