Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_611: 8979 - K00490 CYP4F cytochrome P450, family 4, subfamily F, at 1470707 to 1472980 8979 mRNA_612: 8980 - KOG3183 Predicted Zn-finger protein, at 1473090 to 1474198 8980 mRNA_613: 8981 - K10631 TOPORS E3 ubiquitin-protein ligase Topors, at 1474346 to 1477518 8981 mRNA_614: 8982 - K06875 PDCD5, TFAR19 programmed cell death protein 5, at 1477879 to 1478544 8982 mRNA_615: 8983 - HMMPfam-Haloacid dehalogenase-like hydrolase-PF13419,SUPERFAMILY--SSF56784, at 1478785 to 1480102 8983
Group Condition mRNA_611 mRNA_612 mRNA_613 mRNA_614 mRNA_615
8979
8980
8981
8982
8983
auxotrophy Dropout Complete -1.3 -0.2 -1.4   0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.5 -1.0   -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.4 -0.5   -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 0.2 -0.7   -0.6
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.1 -0.9   0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.3 -0.1   -0.5
growth on ricinoleic acid YNB Glucose -0.0 0.3 -0.6   -0.7
auxotrophy YNB Glucose -0.1 -0.1 -0.7   -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 -0.8   0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 -0.1 -0.1   0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.5 0.1 -0.5   0.0
growth on oleic acid YNB Glucose 0.4 -0.1 -0.8   -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7 -0.5 -0.9   0.0
growth on oleic acid YNB Oleic Acid 0.2 0.1 -0.4   -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 0.0   -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.7 -0.2 -0.4   -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 -0.2   0.5
ypd buoyancy 40 hrs High Buoyancy -0.0 0.1 -0.2   0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 0.1   -0.1
growth on ypd YPD 0.6 -0.1 -0.4   0.5
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 0.5 -0.1   -0.2
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