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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_608: 8976 - K09490 HSPA5, BIP heat shock 70kDa protein 5, at 1462266 to 1464196
8976
mRNA_609: 8977 - K19001 HELLS, DDM1 ATP-dependent DNA helicase, at 1464752 to 1468761
8977
mRNA_610: 8978 - K06961 KRR1 ribosomal RNA assembly protein, at 1469039 to 1470636
8978
mRNA_611: 8979 - K00490 CYP4F cytochrome P450, family 4, subfamily F, at 1470707 to 1472980
8979
mRNA_612: 8980 - KOG3183 Predicted Zn-finger protein, at 1473090 to 1474198
8980
Group
Condition
mRNA_608
mRNA_609
mRNA_610
mRNA_611
mRNA_612
8976
8977
8978
8979
8980
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-1.1
-0.1
auxotrophy
Dropout Complete
0.2
-1.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.4
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.4
0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.0
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
-0.3
-0.4
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.3
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.5
0.1
auxotrophy
YNB Glucose
0.2
-0.1
-0.1
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
0.3
growth on oleic acid
YNB Oleic Acid
-0.2
0.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.7
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.0
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.5
-0.2
-0.1
growth on oleic acid
YNB Glucose
-0.0
0.4
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
0.6
0.5
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.7
-0.2
growth on ypd
YPD
0.0
0.6
-0.1
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