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Cofit
Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_600: 8968 - K17785 IMMT, FCJ1, MNOS2 mitofilin, at 1443273 to 1445582
8968
mRNA_601: 8969 - K01784 galE, GALE UDP-glucose 4-epimerase, at 1446011 to 1447734
8969
mRNA_602: 8970 - K14642 YND1 golgi apyrase, at 1448012 to 1450852
8970
mRNA_603: 8971 - Hypothetical Protein, at 1451407 to 1452135
8971
mRNA_604: 8972 - K17871 ndh1 NADH-ubiquinone reductase (non-electrogenic), at 1452523 to 1454931
8972
Group
Condition
mRNA_600
mRNA_601
mRNA_602
mRNA_603
mRNA_604
8968
8969
8970
8971
8972
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
0.3
-2.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
-0.2
-1.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.4
-1.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.9
0.3
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-0.3
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.2
-0.7
auxotrophy
YNB Glucose 75mM Methionine
-0.4
0.5
-0.8
growth on ypd
YPD
-0.1
-0.5
0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.7
0.5
-0.4
growth on ricinoleic acid
YNB Glucose
-0.7
0.6
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.1
-0.8
auxotrophy
YNB Glucose
-0.7
0.6
-0.4
growth on oleic acid
YNB Glucose
-0.5
0.5
-0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.2
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.5
0.3
ypd buoyancy
40 hrs High Buoyancy
0.2
0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.7
0.4
0.3
auxotrophy
Dropout Complete
-0.3
0.5
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.6
1.9
0.5
growth on oleic acid
YNB Oleic Acid
-0.5
0.9
1.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.4
1.4
2.1
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