Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_595: 8963 - KOG0137 Very-long-chain acyl-CoA dehydrogenase, at 1429134 to 1431703 8963 mRNA_596: 8964 - Hypothetical Protein, at 1432148 to 1433908 8964 mRNA_597: 8965 - ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616, at 1435317 to 1436977 8965 mRNA_598: 8966 - ProSiteProfiles-F-box domain profile.-PS50181, at 1437888 to 1441324 8966 mRNA_599: 8967 - HMMPfam-2'-5' RNA ligase superfamily-PF13563,SUPERFAMILY--SSF55144, at 1441458 to 1442153 8967
Group Condition mRNA_595 mRNA_596 mRNA_597 mRNA_598 mRNA_599
8963
8964
8965
8966
8967
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -1.0 -1.3 0.5 -0.6
growth on oleic acid YNB Oleic Acid -2.1 -0.1 -0.2 -0.0 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.3 -0.5 -0.1 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 -0.3 0.4 -0.1 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.0 -0.7 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.4 1.1 -0.0 -1.4
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.6 0.2 -0.1 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -1.3 0.1 0.8 -0.2 -0.3
growth on oleic acid YNB Glucose -0.5 -0.3 -0.1 0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.3 -0.1 -0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine 0.1 0.2 -0.6 0.1 -0.4
auxotrophy Dropout Complete -0.1 0.1 -0.6 -0.1 0.3
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.1 -0.7 0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.7 -0.2 -0.1 -0.5
growth on ricinoleic acid YNB Glucose -0.1 -0.0 0.5 -0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.6 0.7 -0.0 -0.3
growth on ypd YPD -0.2 0.7 -0.3 0.1 -0.4
auxotrophy YNB Glucose 0.1 0.1 -0.3 -0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.3 0.9 0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.3 0.7 0.3 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.2 0.9 0.4 0.7
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