Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_588: 8956 - K12609 CAF120 CCR4-NOT transcriptional complex subunit CAF120, at 1406393 to 1408614 8956 mRNA_589: 8957 - KOG1763 Uncharacterized conserved protein, contains CCCH-type Zn-finger, at 1412720 to 1414364 8957 mRNA_590: 8958 - K05543 DUS2 tRNA-dihydrouridine synthase 2, at 1414639 to 1416336 8958 mRNA_591: 8959 - K01915 glnA, GLUL glutamine synthetase, at 1416451 to 1418413 8959 mRNA_592: 8960 - K10747 LIG1 DNA ligase 1, at 1418540 to 1422145 8960
Group Condition mRNA_588 mRNA_589 mRNA_590 mRNA_591 mRNA_592
8956
8957
8958
8959
8960
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.7   -0.5 -0.7
auxotrophy Dropout Complete -0.4 -0.7   -0.2 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.4   -0.6 -0.3
growth on ypd YPD -0.3 -0.6   0.1 -0.2
growth on oleic acid YNB Glucose -0.2 -0.7   -0.1 0.1
auxotrophy YNB Glucose -0.2 -0.2   -0.5 0.1
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.3   -0.1 -0.3
growth on oleic acid YNB Oleic Acid -0.2 0.1   -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.1   -0.5 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.5   -0.2 0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.1   -0.3 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.4   -0.2 0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.0   -0.5 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.1   -0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.4   -0.4 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.4   -0.2 -0.0
growth on ricinoleic acid YNB Glucose -0.3 0.3   -0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.2   0.0 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.5   0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.8   -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.4   0.4 0.0
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