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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_588: 8956 - K12609 CAF120 CCR4-NOT transcriptional complex subunit CAF120, at 1406393 to 1408614
8956
mRNA_589: 8957 - KOG1763 Uncharacterized conserved protein, contains CCCH-type Zn-finger, at 1412720 to 1414364
8957
mRNA_590: 8958 - K05543 DUS2 tRNA-dihydrouridine synthase 2, at 1414639 to 1416336
8958
mRNA_591: 8959 - K01915 glnA, GLUL glutamine synthetase, at 1416451 to 1418413
8959
mRNA_592: 8960 - K10747 LIG1 DNA ligase 1, at 1418540 to 1422145
8960
Group
Condition
mRNA_588
mRNA_589
mRNA_590
mRNA_591
mRNA_592
8956
8957
8958
8959
8960
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.7
-0.5
-0.7
auxotrophy
Dropout Complete
-0.4
-0.7
-0.2
0.0
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.4
-0.6
-0.3
growth on ypd
YPD
-0.3
-0.6
0.1
-0.2
growth on oleic acid
YNB Glucose
-0.2
-0.7
-0.1
0.1
auxotrophy
YNB Glucose
-0.2
-0.2
-0.5
0.1
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.3
-0.1
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
0.1
-0.4
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.1
-0.5
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.5
-0.2
0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.1
-0.3
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
-0.4
-0.2
0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.0
-0.5
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.1
-0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.4
-0.4
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
0.4
-0.2
-0.0
growth on ricinoleic acid
YNB Glucose
-0.3
0.3
-0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.2
0.0
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.5
0.2
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.8
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.4
0.4
0.0
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