Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_586: 8954 - K20291 COG4, COD1 conserved oligomeric Golgi complex subunit 4, at 1398655 to 1401525 8954 mRNA_587: 8955 - K10846 ERCC5, XPG, RAD2 DNA excision repair protein ERCC-5, at 1401874 to 1405590 8955 mRNA_588: 8956 - K12609 CAF120 CCR4-NOT transcriptional complex subunit CAF120, at 1406393 to 1408614 8956 mRNA_589: 8957 - KOG1763 Uncharacterized conserved protein, contains CCCH-type Zn-finger, at 1412720 to 1414364 8957 mRNA_590: 8958 - K05543 DUS2 tRNA-dihydrouridine synthase 2, at 1414639 to 1416336 8958
Group Condition mRNA_586 mRNA_587 mRNA_588 mRNA_589 mRNA_590
8954
8955
8956
8957
8958
facs on lipid accumulation Sorted Low BODIPY Gate   -1.5 -0.0 -0.5  
facs on lipid accumulation Sorted High BODIPY Gate   -1.1 0.0 -0.4  
growth on oleic acid YNB Glucose   -0.1 -0.2 -0.7  
ypd buoyancy 40 hrs No Buoyancy Separation   -0.1 -0.1 -0.7  
facs on lipid accumulation Sorted No BODIPY Gate   -1.1 0.1 0.2  
auxotrophy Dropout Complete   0.2 -0.4 -0.7  
growth on ypd YPD   0.2 -0.3 -0.6  
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.4 -0.3 0.1  
growth on oleic acid YNB Oleic Acid   -0.3 -0.2 0.1  
auxotrophy YNB Glucose 75mM Arginine   0.1 -0.3 -0.1  
auxotrophy YNB Glucose 75mM Methionine   -0.0 -0.2 -0.0  
auxotrophy YNB Glucose   0.2 -0.2 -0.2  
ypd buoyancy 40 hrs High Buoyancy   0.2 0.0 -0.3  
ypd buoyancy 40 hrs Low Buoyancy   0.2 0.1 -0.4  
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.4 -0.2 0.5  
growth on ricinoleic acid YNB Glucose   0.0 -0.3 0.3  
growth on ricinoleic acid YNB Ricinoleic Acid   -0.1 -0.3 0.4  
ypd buoyancy 40 hrs Median Buoyancy   0.1 0.2 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.2 -0.1 0.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1 -0.3 0.4  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.0 -0.1 0.8  
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