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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_586: 8954 - K20291 COG4, COD1 conserved oligomeric Golgi complex subunit 4, at 1398655 to 1401525
8954
mRNA_587: 8955 - K10846 ERCC5, XPG, RAD2 DNA excision repair protein ERCC-5, at 1401874 to 1405590
8955
mRNA_588: 8956 - K12609 CAF120 CCR4-NOT transcriptional complex subunit CAF120, at 1406393 to 1408614
8956
mRNA_589: 8957 - KOG1763 Uncharacterized conserved protein, contains CCCH-type Zn-finger, at 1412720 to 1414364
8957
mRNA_590: 8958 - K05543 DUS2 tRNA-dihydrouridine synthase 2, at 1414639 to 1416336
8958
Group
Condition
mRNA_586
mRNA_587
mRNA_588
mRNA_589
mRNA_590
8954
8955
8956
8957
8958
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.5
-0.0
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-1.1
0.0
-0.4
growth on oleic acid
YNB Glucose
-0.1
-0.2
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.1
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-1.1
0.1
0.2
auxotrophy
Dropout Complete
0.2
-0.4
-0.7
growth on ypd
YPD
0.2
-0.3
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.3
0.1
growth on oleic acid
YNB Oleic Acid
-0.3
-0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.2
-0.0
auxotrophy
YNB Glucose
0.2
-0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.2
0.0
-0.3
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.2
0.5
growth on ricinoleic acid
YNB Glucose
0.0
-0.3
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.3
0.4
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.1
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.3
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.1
0.8
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