Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_585: 8953 - HMMPfam-Polynucleotide kinase 3 phosphatase-PF08645,HMMPfam-AAA domain-PF13671,SUPERFAMILY--SSF52540,SUPERFAMILY--SSF56784, at 1396746 to 1398490 8953 mRNA_586: 8954 - K20291 COG4, COD1 conserved oligomeric Golgi complex subunit 4, at 1398655 to 1401525 8954 mRNA_587: 8955 - K10846 ERCC5, XPG, RAD2 DNA excision repair protein ERCC-5, at 1401874 to 1405590 8955 mRNA_588: 8956 - K12609 CAF120 CCR4-NOT transcriptional complex subunit CAF120, at 1406393 to 1408614 8956 mRNA_589: 8957 - KOG1763 Uncharacterized conserved protein, contains CCCH-type Zn-finger, at 1412720 to 1414364 8957
Group Condition mRNA_585 mRNA_586 mRNA_587 mRNA_588 mRNA_589
8953
8954
8955
8956
8957
facs on lipid accumulation Sorted Low BODIPY Gate -0.1   -1.5 -0.0 -0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.2   -1.1 0.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.3   -1.1 0.1 0.2
growth on oleic acid YNB Glucose -0.0   -0.1 -0.2 -0.7
growth on ypd YPD -0.3   0.2 -0.3 -0.6
auxotrophy Dropout Complete -0.0   0.2 -0.4 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1   -0.4 -0.3 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5   -0.4 -0.2 0.5
growth on oleic acid YNB Oleic Acid -0.0   -0.3 -0.2 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.5   -0.1 -0.1 -0.7
auxotrophy YNB Glucose 75mM Arginine -0.1   0.1 -0.3 -0.1
auxotrophy YNB Glucose -0.1   0.2 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5   -0.2 -0.1 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5   0.1 -0.3 0.4
ypd buoyancy 40 hrs Low Buoyancy -0.0   0.2 0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine 0.1   -0.0 -0.2 -0.0
growth on ricinoleic acid YNB Glucose -0.1   0.0 -0.3 0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1   -0.1 -0.3 0.4
ypd buoyancy 40 hrs High Buoyancy 0.3   0.2 0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.0   0.1 0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3   -0.0 -0.1 0.8
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