Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_579: 8947 - K10686 UBE1C, UBA3 ubiquitin-activating enzyme E1 C, at 1386772 to 1388532 8947 mRNA_580: 8948 - Hypothetical Protein, at 1388734 to 1389540 8948 mRNA_581: 8949 - Interpro ERCC4 domain 0, at 1389971 to 1392481 8949 mRNA_582: 8950 - K02876 RP-L15, MRPL15, rplO large subunit ribosomal protein L15, at 1392598 to 1393775 8950 mRNA_583: 8951 - HMMPfam-Protein of Unknown function (DUF1690)-PF07956, at 1393876 to 1394660 8951
Group Condition mRNA_579 mRNA_580 mRNA_581 mRNA_582 mRNA_583
8947
8948
8949
8950
8951
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.1 -0.7   0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.1 -0.3   -0.5
facs on lipid accumulation Sorted No BODIPY Gate   -0.1 -0.5   -0.1
growth on oleic acid YNB Glucose   -0.3 -0.3   -0.1
facs on lipid accumulation Sorted Low BODIPY Gate   0.1 -0.7   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.2 -0.6   0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.3 -0.4   0.2
growth on oleic acid YNB Oleic Acid   -0.1 -0.2   -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.2 -0.3   0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.1 0.2   -0.4
growth on ypd YPD   -0.2 0.3   -0.2
ypd buoyancy 40 hrs High Buoyancy   0.1 -0.2   0.1
auxotrophy YNB Glucose 75mM Arginine   0.0 0.2   -0.2
growth on ricinoleic acid YNB Glucose   0.1 0.1   -0.1
ypd buoyancy 40 hrs Median Buoyancy   -0.0 0.2   -0.0
growth on ricinoleic acid YNB Ricinoleic Acid   0.3 0.2   -0.4
ypd buoyancy 40 hrs Low Buoyancy   0.1 0.2   -0.1
auxotrophy YNB Glucose   0.1 0.1   -0.0
auxotrophy Dropout Complete   0.0 0.5   -0.2
auxotrophy YNB Glucose 75mM Methionine   0.1 0.4   0.2
ypd buoyancy 40 hrs No Buoyancy Separation   -0.3 1.0   0.5
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