Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_574: 8942 - K02999 RPA1, POLR1A DNA-directed RNA polymerase I subunit RPA1, at 1372563 to 1378346 8942 mRNA_575: 8943 - K00940 ndk, NME nucleoside-diphosphate kinase, at 1378684 to 1379466 8943 mRNA_576: 8944 - K20182 VPS33 vacuolar protein sorting-associated protein 33, at 1379753 to 1382507 8944 mRNA_577: 8945 - Hypothetical Protein, at 1382684 to 1384433 8945 mRNA_578: 8946 - K05687 PARK7 protein DJ-1, at 1384762 to 1386533 8946
Group Condition mRNA_574 mRNA_575 mRNA_576 mRNA_577 mRNA_578
8942
8943
8944
8945
8946
ypd buoyancy 40 hrs No Buoyancy Separation     -2.9 0.2 -2.6
facs on lipid accumulation Sorted Low BODIPY Gate     -2.2 -0.5 0.3
growth on ypd YPD     -1.0 -0.1 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.6 0.3 -0.4
growth on ricinoleic acid YNB Glucose     -1.0 0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine     -0.5 0.4 -0.4
facs on lipid accumulation Sorted High BODIPY Gate     -1.1 0.5 0.3
growth on ricinoleic acid YNB Ricinoleic Acid     -0.4 0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate     -0.7 0.2 0.2
auxotrophy Dropout Complete     -0.4 0.6 -0.2
growth on oleic acid YNB Glucose     0.1 0.1 -0.2
auxotrophy YNB Glucose     -0.2 0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine     0.2 0.4 -0.3
ypd buoyancy 40 hrs High Buoyancy     -0.5 0.6 0.3
ypd buoyancy 40 hrs Median Buoyancy     -0.3 0.2 0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.7 0.1 1.2
growth on oleic acid YNB Oleic Acid     0.3 0.4 0.1
ypd buoyancy 40 hrs Low Buoyancy     0.3 0.4 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -0.5 0.2 1.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.1 0.2 1.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -0.2 -0.1 2.2
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