Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_573: 8941 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 1369955 to 1372100 8941 mRNA_574: 8942 - K02999 RPA1, POLR1A DNA-directed RNA polymerase I subunit RPA1, at 1372563 to 1378346 8942 mRNA_575: 8943 - K00940 ndk, NME nucleoside-diphosphate kinase, at 1378684 to 1379466 8943 mRNA_576: 8944 - K20182 VPS33 vacuolar protein sorting-associated protein 33, at 1379753 to 1382507 8944 mRNA_577: 8945 - Hypothetical Protein, at 1382684 to 1384433 8945
Group Condition mRNA_573 mRNA_574 mRNA_575 mRNA_576 mRNA_577
8941
8942
8943
8944
8945
ypd buoyancy 40 hrs No Buoyancy Separation 0.7     -2.9 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 1.0     -2.2 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.8     -1.1 0.5
growth on ypd YPD 0.1     -1.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0     -0.6 0.3
growth on ricinoleic acid YNB Glucose 0.4     -1.0 0.4
auxotrophy YNB Glucose 75mM Arginine 0.0     -0.5 0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0     -0.3 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.4     -0.7 0.2
ypd buoyancy 40 hrs High Buoyancy 0.0     -0.5 0.6
growth on ricinoleic acid YNB Ricinoleic Acid 0.5     -0.4 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.1     -0.7 0.1
growth on oleic acid YNB Glucose 0.3     0.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.9     -0.2 -0.1
auxotrophy YNB Glucose 0.4     -0.2 0.5
auxotrophy Dropout Complete 0.5     -0.4 0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5     0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.1     -0.5 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.4     0.3 0.4
auxotrophy YNB Glucose 75mM Methionine 0.6     0.2 0.4
growth on oleic acid YNB Oleic Acid 0.6     0.3 0.4
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