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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_563: 8931 - K05287 PIGF phosphatidylinositol glycan, class F, at 1349685 to 1350957
8931
mRNA_564: 8932 - K01230 MAN1 mannosyl-oligosaccharide alpha-1,2-mannosidase, at 1351046 to 1353534
8932
mRNA_565: 8933 - K03256 TRM6, GCD10 tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit, at 1353645 to 1355726
8933
mRNA_566: 8934 - HMMPfam-Oligosaccaryltransferase-PF10215,SUPERFAMILY--SSF103464, at 1355844 to 1356185
8934
mRNA_567: 8935 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 1356456 to 1359397
8935
Group
Condition
mRNA_563
mRNA_564
mRNA_565
mRNA_566
mRNA_567
8931
8932
8933
8934
8935
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.6
-0.4
0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.4
-0.6
0.4
-0.2
auxotrophy
Dropout Complete
-1.2
-0.3
0.1
-0.3
auxotrophy
YNB Glucose
-1.1
-0.3
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.8
-0.7
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-1.0
-0.2
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.5
-0.4
0.0
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.7
-0.2
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.3
-0.4
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.6
-0.2
0.0
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.1
-0.5
0.2
growth on oleic acid
YNB Glucose
-0.4
-0.2
0.0
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
-0.6
-0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.3
-0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.2
-0.2
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
0.3
-1.1
0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.4
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
0.2
0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
0.4
0.3
0.0
growth on ypd
YPD
0.8
-0.1
-0.1
0.4
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