Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_560: 8928 - Hypothetical Protein, at 1336484 to 1340949 8928 mRNA_561: 8929 - Hypothetical Protein, at 1341305 to 1346099 8929 mRNA_562: 8930 - HMMPfam-HPC2 and ubinuclein domain-PF08729, at 1346639 to 1349486 8930 mRNA_563: 8931 - K05287 PIGF phosphatidylinositol glycan, class F, at 1349685 to 1350957 8931 mRNA_564: 8932 - K01230 MAN1 mannosyl-oligosaccharide alpha-1,2-mannosidase, at 1351046 to 1353534 8932
Group Condition mRNA_560 mRNA_561 mRNA_562 mRNA_563 mRNA_564
8928
8929
8930
8931
8932
growth on oleic acid YNB Glucose -0.2 -0.0 -2.0 -0.4 -0.2
auxotrophy Dropout Complete -0.2 -0.1 -1.0 -1.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -0.1 -0.9 -1.6 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.2 -0.7 -1.4 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3 -0.6 -0.1 -0.8
growth on ricinoleic acid YNB Glucose -0.1 -0.0 -0.7 -0.5 -0.4
growth on oleic acid YNB Oleic Acid 0.1 0.0 -1.1 -0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.3 -0.5 -0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 0.0 0.1 -1.0 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0 0.0 -0.7 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.1 -1.0 -0.4 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.3 -0.3 0.1 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.0 -1.2 0.1 0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.1 -1.1 0.0 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.2 -0.2 0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 -0.3 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.1 -0.2 -0.2 -0.1
growth on ypd YPD 0.2 0.1 -1.1 0.8 -0.1
auxotrophy YNB Glucose -0.1 -0.1 1.3 -1.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.4 0.4 0.3 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.2 1.9 -0.2 -0.6
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