Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_557: 8925 - HMMPfam-Ras association (RalGDS/AF-6) domain-PF00788,ProSiteProfiles-Ras-associating (RA) domain profile.-PS50200,SMART-Ras association (RalGDS/AF-6) domain-SM00314,SUPERFAMILY--SSF54236, at 1324650 to 1329010 8925 mRNA_558: 8926 - HMMPfam-SH3 domain-PF00018,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 1329845 to 1332752 8926 mRNA_559: 8927 - KOG4672 Uncharacterized conserved low complexity protein, at 1333398 to 1335053 8927 mRNA_560: 8928 - Hypothetical Protein, at 1336484 to 1340949 8928 mRNA_561: 8929 - Hypothetical Protein, at 1341305 to 1346099 8929
Group Condition mRNA_557 mRNA_558 mRNA_559 mRNA_560 mRNA_561
8925
8926
8927
8928
8929
facs on lipid accumulation Sorted Low BODIPY Gate 0.0   -2.8 0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.3   -1.4 -0.0 -0.4
auxotrophy YNB Glucose 0.5   -1.2 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2   -0.2 0.0 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.1   -0.7 -0.1 0.0
ypd buoyancy 40 hrs High Buoyancy -0.0   -0.7 0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.3   -0.4 -0.1 0.0
auxotrophy Dropout Complete 0.2   0.0 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.3   -0.2 -0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.2   0.0 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5   0.2 -0.1 -0.3
growth on oleic acid YNB Glucose 0.2   0.4 -0.2 -0.0
growth on ypd YPD 0.2   0.1 0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.0   -0.3 0.0 -0.2
growth on ricinoleic acid YNB Glucose 0.5   0.2 -0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5   -0.0 0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 1.0   -0.5 -0.0 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.6   0.5 0.0 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.2   -0.1 0.0 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.8   1.0 -0.1 -0.3
growth on oleic acid YNB Oleic Acid 0.4   0.9 0.1 0.0
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