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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_557: 8925 - HMMPfam-Ras association (RalGDS/AF-6) domain-PF00788,ProSiteProfiles-Ras-associating (RA) domain profile.-PS50200,SMART-Ras association (RalGDS/AF-6) domain-SM00314,SUPERFAMILY--SSF54236, at 1324650 to 1329010
8925
mRNA_558: 8926 - HMMPfam-SH3 domain-PF00018,ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 1329845 to 1332752
8926
mRNA_559: 8927 - KOG4672 Uncharacterized conserved low complexity protein, at 1333398 to 1335053
8927
mRNA_560: 8928 - Hypothetical Protein, at 1336484 to 1340949
8928
mRNA_561: 8929 - Hypothetical Protein, at 1341305 to 1346099
8929
Group
Condition
mRNA_557
mRNA_558
mRNA_559
mRNA_560
mRNA_561
8925
8926
8927
8928
8929
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
-2.8
0.1
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
-1.4
-0.0
-0.4
auxotrophy
YNB Glucose
0.5
-1.2
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.2
0.0
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.7
-0.1
0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.7
0.3
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.4
-0.1
0.0
auxotrophy
Dropout Complete
0.2
0.0
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.2
-0.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.0
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
0.2
-0.1
-0.3
growth on oleic acid
YNB Glucose
0.2
0.4
-0.2
-0.0
growth on ypd
YPD
0.2
0.1
0.2
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
1.0
-0.3
0.0
-0.2
growth on ricinoleic acid
YNB Glucose
0.5
0.2
-0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.5
-0.0
0.3
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
1.0
-0.5
-0.0
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.6
0.5
0.0
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
1.2
-0.1
0.0
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.8
1.0
-0.1
-0.3
growth on oleic acid
YNB Oleic Acid
0.4
0.9
0.1
0.0
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