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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_553: 8921 - KOG0907 Thioredoxin, at 1318121 to 1318450
8921
mRNA_554: 8922 - K13337 PEX19 peroxin-19, at 1319460 to 1321018
8922
mRNA_555: 8923 - K03115 CSNK2B casein kinase II subunit beta, at 1321464 to 1322533
8923
mRNA_556: 8924 - HMMPfam-Acetyltransferase (GNAT) domain-PF13302,SUPERFAMILY--SSF55729, at 1322822 to 1323921
8924
mRNA_557: 8925 - HMMPfam-Ras association (RalGDS/AF-6) domain-PF00788,ProSiteProfiles-Ras-associating (RA) domain profile.-PS50200,SMART-Ras association (RalGDS/AF-6) domain-SM00314,SUPERFAMILY--SSF54236, at 1324650 to 1329010
8925
Group
Condition
mRNA_553
mRNA_554
mRNA_555
mRNA_556
mRNA_557
8921
8922
8923
8924
8925
ypd buoyancy
40 hrs Median Buoyancy
-0.4
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.4
0.2
growth on oleic acid
YNB Glucose
-0.4
0.2
growth on ypd
YPD
-0.3
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.3
0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.3
auxotrophy
Dropout Complete
-0.1
0.2
auxotrophy
YNB Glucose
-0.2
0.5
growth on oleic acid
YNB Oleic Acid
-0.1
0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
0.6
growth on ricinoleic acid
YNB Glucose
0.2
0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
1.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.9
0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.7
0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.6
1.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
1.2
1.0
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