Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_549: 8917 - K12618 XRN1, SEP1, KEM1 5'-3' exoribonuclease 1, at 1306606 to 1311810 8917 mRNA_550: 8918 - KOG4391 Predicted alpha/beta hydrolase BEM46, at 1312000 to 1313154 8918 mRNA_551: 8919 - KOG1515 Arylacetamide deacetylase, at 1313966 to 1316695 8919 mRNA_552: 8920 - KOG1761 Signal recognition particle, subunit Srp14, at 1316933 to 1317920 8920 mRNA_553: 8921 - KOG0907 Thioredoxin, at 1318121 to 1318450 8921
Group Condition mRNA_549 mRNA_550 mRNA_551 mRNA_552 mRNA_553
8917
8918
8919
8920
8921
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.4 0.2 -0.9  
growth on oleic acid YNB Oleic Acid -0.0 -0.6 -0.3 -0.5  
auxotrophy YNB Glucose 75mM Arginine -1.0 -0.2 -0.2 -0.0  
auxotrophy YNB Glucose 75mM Methionine -1.1 -0.5 0.1 0.2  
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.4 0.3 -1.1  
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.2 0.5 -1.8  
growth on oleic acid YNB Glucose -0.5 -0.4 0.2 -0.3  
auxotrophy Dropout Complete 0.1 -0.3 -0.5 -0.2  
growth on ricinoleic acid YNB Ricinoleic Acid -1.1 0.1 0.1 -0.0  
auxotrophy YNB Glucose -0.7 -0.1 0.2 0.1  
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.1 -0.2 -0.5  
ypd buoyancy 40 hrs High Buoyancy 0.0 0.2 -0.0 -0.1  
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.0 -0.3 0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 0.2 0.5 -0.1  
growth on ricinoleic acid YNB Glucose -0.2 0.2 0.6 -0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.8 0.1 0.0 -0.5  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7 -0.0 0.2 -0.3  
growth on ypd YPD 0.3 0.2 -0.1 0.5  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.4 0.2 0.0 -0.6  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.0 0.2 -0.3 0.3  
ypd buoyancy 40 hrs No Buoyancy Separation 1.1 0.5 -0.6 0.5  
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