Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_545: 8913 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1295068 to 1298428 8913 mRNA_546: 8914 - K00799 GST, gst glutathione S-transferase, at 1298658 to 1299726 8914 mRNA_547: 8915 - KOG2385 Uncharacterized conserved protein, at 1299978 to 1303835 8915 mRNA_548: 8916 - K15084 SLC25A16, GDA, LEU5 solute carrier family 25 (mitochondrial carrier protein), member 16, at 1304411 to 1305873 8916 mRNA_549: 8917 - K12618 XRN1, SEP1, KEM1 5'-3' exoribonuclease 1, at 1306606 to 1311810 8917
Group Condition mRNA_545 mRNA_546 mRNA_547 mRNA_548 mRNA_549
8913
8914
8915
8916
8917
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.4 -1.9   -0.6
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.4 -1.8   0.0
auxotrophy YNB Glucose 0.1 -0.6 -0.2   -0.7
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.5 0.2   -1.0
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.3 -1.1   0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.5 0.6   -0.4
auxotrophy Dropout Complete -0.3 -0.3 -0.4   0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 0.1 0.2   -1.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.2 -0.5   -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.2 -0.6   0.3
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.6 1.2   -1.1
growth on oleic acid YNB Glucose -0.0 -0.4 0.7   -0.5
growth on oleic acid YNB Oleic Acid 0.2 -0.2 -0.2   -0.0
growth on ricinoleic acid YNB Glucose 0.0 -0.5 0.7   -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.2 -0.1   0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.1 -0.6   0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.6 -0.6   1.1
growth on ypd YPD -0.2 0.8 0.3   0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.6 0.3   0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.4 0.1   1.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.3 0.6   1.0
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