Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_544: 8912 - K00902 E2.7.1.108 dolichol kinase, at 1291246 to 1294493 8912 mRNA_545: 8913 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1295068 to 1298428 8913 mRNA_546: 8914 - K00799 GST, gst glutathione S-transferase, at 1298658 to 1299726 8914 mRNA_547: 8915 - KOG2385 Uncharacterized conserved protein, at 1299978 to 1303835 8915 mRNA_548: 8916 - K15084 SLC25A16, GDA, LEU5 solute carrier family 25 (mitochondrial carrier protein), member 16, at 1304411 to 1305873 8916
Group Condition mRNA_544 mRNA_545 mRNA_546 mRNA_547 mRNA_548
8912
8913
8914
8915
8916
ypd buoyancy 40 hrs High Buoyancy   0.1 -0.4 -1.8  
facs on lipid accumulation Sorted Low BODIPY Gate   -0.2 0.4 -1.9  
ypd buoyancy 40 hrs Low Buoyancy   0.1 -0.3 -1.1  
auxotrophy Dropout Complete   -0.3 -0.3 -0.4  
facs on lipid accumulation Sorted High BODIPY Gate   0.1 -0.2 -0.6  
auxotrophy YNB Glucose   0.1 -0.6 -0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.0 0.1 -0.6  
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.6 -0.5 0.6  
facs on lipid accumulation Sorted No BODIPY Gate   -0.2 0.2 -0.5  
auxotrophy YNB Glucose 75mM Arginine   -0.1 -0.5 0.2  
ypd buoyancy 40 hrs Median Buoyancy   0.0 -0.2 -0.1  
growth on oleic acid YNB Oleic Acid   0.2 -0.2 -0.2  
ypd buoyancy 40 hrs No Buoyancy Separation   -0.1 0.6 -0.6  
growth on ricinoleic acid YNB Glucose   0.0 -0.5 0.7  
growth on oleic acid YNB Glucose   -0.0 -0.4 0.7  
growth on ricinoleic acid YNB Ricinoleic Acid   0.0 0.1 0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1 0.4 0.1  
auxotrophy YNB Glucose 75mM Methionine   -0.0 -0.6 1.2  
growth on ypd YPD   -0.2 0.8 0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.2 0.6 0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.3 0.3 0.6  
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