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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_544: 8912 - K00902 E2.7.1.108 dolichol kinase, at 1291246 to 1294493
8912
mRNA_545: 8913 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1295068 to 1298428
8913
mRNA_546: 8914 - K00799 GST, gst glutathione S-transferase, at 1298658 to 1299726
8914
mRNA_547: 8915 - KOG2385 Uncharacterized conserved protein, at 1299978 to 1303835
8915
mRNA_548: 8916 - K15084 SLC25A16, GDA, LEU5 solute carrier family 25 (mitochondrial carrier protein), member 16, at 1304411 to 1305873
8916
Group
Condition
mRNA_544
mRNA_545
mRNA_546
mRNA_547
mRNA_548
8912
8913
8914
8915
8916
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.4
-1.8
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
0.4
-1.9
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.3
-1.1
auxotrophy
Dropout Complete
-0.3
-0.3
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.2
-0.6
auxotrophy
YNB Glucose
0.1
-0.6
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
0.1
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.5
0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.2
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.5
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
0.2
-0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
0.6
-0.6
growth on ricinoleic acid
YNB Glucose
0.0
-0.5
0.7
growth on oleic acid
YNB Glucose
-0.0
-0.4
0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
0.1
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.4
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.6
1.2
growth on ypd
YPD
-0.2
0.8
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.6
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.3
0.6
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