Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_536: 8904 - K09548 PFDN1 prefoldin subunit 1, at 1273602 to 1274230 8904 mRNA_537: 8905 - KOG0725 Reductases with broad range of substrate specificities, at 1274632 to 1275903 8905 mRNA_538: 8906 - Hypothetical Protein, at 1276720 to 1277120 8906 mRNA_539: 8907 - HMMPfam-Zinc finger, C2H2 type-PF00096,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157, at 1277629 to 1279340 8907 mRNA_540: 8908 - KOG2571 Chitin synthase/hyaluronan synthase (glycosyltransferases), at 1279854 to 1286363 8908
Group Condition mRNA_536 mRNA_537 mRNA_538 mRNA_539 mRNA_540
8904
8905
8906
8907
8908
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.1 -0.5 -2.3 -1.4
auxotrophy Dropout Complete -1.0 -0.1 0.0 -1.9 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.7 0.2 -0.1 -1.6 -1.8
growth on ricinoleic acid YNB Glucose 0.1 0.0 -0.1 -2.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -1.8 -0.6 0.7 -0.8 0.2
facs on lipid accumulation Sorted High BODIPY Gate -1.1 -0.0 0.3 -1.0 -0.3
growth on oleic acid YNB Glucose -0.2 -0.2 0.4 -2.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 0.0 0.6 -1.9 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 0.0 0.0 -1.6 -0.0
auxotrophy YNB Glucose -0.6 0.1 0.4 -1.5 -0.2
growth on oleic acid YNB Oleic Acid -0.3 0.2 0.1 -1.5 -0.3
growth on ypd YPD -0.5 0.4 0.1 -0.8 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -1.1 -0.1 0.2 -0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 0.1 0.4 -0.4 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 0.3 0.4 -0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 0.0 0.3 0.9 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.2 0.1 -0.5 0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 0.2 0.2 -0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.4 -0.2 0.4 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.7 0.1 0.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.1 1.0 -0.2 0.2
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