Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_534: 8902 - K08054 CANX calnexin, at 1270222 to 1272470 8902 mRNA_535: 8903 - HMMPfam-Ribosomal protein S21-PF01165,TIGRFAM-S21p ribosomal protein S21-TIGR00030, at 1272701 to 1273396 8903 mRNA_536: 8904 - K09548 PFDN1 prefoldin subunit 1, at 1273602 to 1274230 8904 mRNA_537: 8905 - KOG0725 Reductases with broad range of substrate specificities, at 1274632 to 1275903 8905 mRNA_538: 8906 - Hypothetical Protein, at 1276720 to 1277120 8906
Group Condition mRNA_534 mRNA_535 mRNA_536 mRNA_537 mRNA_538
8902
8903
8904
8905
8906
facs on lipid accumulation Sorted Low BODIPY Gate -0.1   -1.8 -0.6 0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.4   -1.1 -0.0 0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.3   -1.1 -0.1 0.2
auxotrophy Dropout Complete -0.1   -1.0 -0.1 0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1   -1.1 0.0 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3   -0.8 0.1 0.4
auxotrophy YNB Glucose 75mM Methionine -0.1   -0.2 0.0 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1   0.3 0.1 -0.5
growth on oleic acid YNB Glucose -0.0   -0.2 -0.2 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2   -0.5 0.3 0.4
ypd buoyancy 40 hrs High Buoyancy -0.3   -0.1 0.2 0.2
growth on ricinoleic acid YNB Glucose -0.0   0.1 0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2   -0.4 0.0 0.6
auxotrophy YNB Glucose 0.2   -0.6 0.1 0.4
growth on ypd YPD 0.1   -0.5 0.4 0.1
growth on oleic acid YNB Oleic Acid 0.4   -0.3 0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.2   -0.1 0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1   0.4 -0.2 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0   -0.1 0.1 1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0   0.3 0.7 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.5   0.7 0.2 -0.1
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