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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_517: 8885 - K07508 ACAA2 acetyl-CoA acyltransferase 2, at 1229501 to 1231364
8885
mRNA_518: 8886 - HMMPfam-Major Facilitator Superfamily-PF07690,SUPERFAMILY--SSF103473, at 1231693 to 1233306
8886
mRNA_519: 8887 - KOG0767 Mitochondrial phosphate carrier protein, at 1234410 to 1235210
8887
mRNA_520: 8888 - Hypothetical Protein, at 1235308 to 1236592
8888
mRNA_521: 8889 - K15102 SLC25A3, PHC, PIC solute carrier family 25 (mitochondrial phosphate transporter), member 3, at 1236755 to 1238717
8889
Group
Condition
mRNA_517
mRNA_518
mRNA_519
mRNA_520
mRNA_521
8885
8886
8887
8888
8889
auxotrophy
YNB Glucose 75mM Arginine
-0.6
0.2
-0.8
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
-0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.0
0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.2
0.3
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.3
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.4
-0.3
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.3
-0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.5
0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.0
-0.5
auxotrophy
Dropout Complete
-0.6
0.0
0.1
growth on oleic acid
YNB Oleic Acid
-0.4
0.3
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.0
-0.2
growth on oleic acid
YNB Glucose
-0.4
0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.0
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
-0.4
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
0.1
0.0
growth on ypd
YPD
0.2
-0.2
-0.3
auxotrophy
YNB Glucose
-0.4
0.5
-0.1
growth on ricinoleic acid
YNB Glucose
-0.3
0.3
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
-0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.1
0.4
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