Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_510: 8878 - K01922 PPCS, coaB phosphopantothenate-cysteine ligase, at 1214489 to 1216016 8878 mRNA_511: 8879 - KOG1426 FOG RCC1 domain, at 1216193 to 1218102 8879 mRNA_512: 8880 - HMMPfam-Glutathione S-transferase, C-terminal domain-PF13410,HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,ProSiteProfiles-Soluble glutathione S-transferase N-terminal domain profile.-PS50404,ProSiteProfiles-Soluble glutathione S-transferase C-terminal domain profile.-PS50405,SUPERFAMILY--SSF47616,SUPERFAMILY--SSF52833, at 1218210 to 1219403 8880 mRNA_513: 8881 - K09468 MSN2_4 zinc finger protein MSN2/4, at 1221466 to 1223534 8881 mRNA_514: 8882 - KOG0417 Ubiquitin-protein ligase, at 1224473 to 1225235 8882
Group Condition mRNA_510 mRNA_511 mRNA_512 mRNA_513 mRNA_514
8878
8879
8880
8881
8882
ypd buoyancy 40 hrs No Buoyancy Separation   -0.5 0.2 -0.2 -3.4
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.2 -0.1 -0.1 -1.3
auxotrophy YNB Glucose 75mM Methionine   0.3 0.3 0.1 -1.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1 -0.1 0.0 -1.1
ypd buoyancy 40 hrs Low Buoyancy   -0.2 0.0 0.2 -1.0
ypd buoyancy 40 hrs High Buoyancy   -0.2 0.0 0.2 -0.9
growth on ricinoleic acid YNB Ricinoleic Acid   0.0 -0.2 0.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate   0.5 -0.1 -0.5 -0.6
growth on ypd YPD   0.2 -0.0 0.2 -1.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.4 -0.2 0.3 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate   -0.2 -0.4 -0.0 0.1
growth on ricinoleic acid YNB Glucose   0.2 -0.1 0.1 -0.6
auxotrophy YNB Glucose 75mM Arginine   0.1 0.0 0.4 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.2 -0.2 0.4 0.1
ypd buoyancy 40 hrs Median Buoyancy   0.3 0.2 0.1 -0.5
auxotrophy Dropout Complete   0.3 0.4 0.5 -1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.0 -0.3 0.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate   -0.2 -0.1 0.0 0.7
auxotrophy YNB Glucose   0.3 0.2 0.4 -0.3
growth on oleic acid YNB Glucose   0.4 -0.3 0.5 -0.0
growth on oleic acid YNB Oleic Acid   0.2 0.1 0.7 0.6
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