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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_499: 8867 - K00850 pfkA, PFK 6-phosphofructokinase 1, at 1185314 to 1188631
8867
mRNA_500: 8868 - KOG2543 Origin recognition complex, subunit 5, at 1188933 to 1191266
8868
mRNA_501: 8869 - K11338 RUVBL2, RVB2, INO80J RuvB-like protein 2, at 1191425 to 1193408
8869
mRNA_502: 8870 - ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089, at 1193819 to 1194942
8870
mRNA_503: 8871 - Hypothetical Protein, at 1195207 to 1198729
8871
Group
Condition
mRNA_499
mRNA_500
mRNA_501
mRNA_502
mRNA_503
8867
8868
8869
8870
8871
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
-1.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
-0.1
growth on ricinoleic acid
YNB Glucose
0.1
-0.8
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.6
auxotrophy
YNB Glucose
-0.2
-0.5
auxotrophy
Dropout Complete
-0.0
-0.6
auxotrophy
YNB Glucose 75mM Methionine
0.0
-0.5
growth on oleic acid
YNB Glucose
0.0
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.0
growth on ypd
YPD
0.5
0.1
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