Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_485: 8853 - K13278 ASPG 60kDa lysophospholipase, at 1154487 to 1156857 8853 mRNA_486: 8854 - HMMPfam-Domain of unknown function (DUF202)-PF02656, at 1157048 to 1157778 8854 mRNA_487: 8855 - HMMPfam-Thioredoxin-PF00085,HMMPfam-PITH domain-PF06201,PRINTS-Thioredoxin family signature-PR00421,ProSitePatterns-Thioredoxin family active site.-PS00194,ProSiteProfiles-Thioredoxin domain profile.-PS51352,ProSiteProfiles-PITH domain profile.-PS51532,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF52833, at 1158062 to 1159223 8855 mRNA_488: 8856 - Hypothetical Protein, at 1159440 to 1160357 8856 mRNA_489: 8857 - K07179 RIOK2 RIO kinase 2, at 1162122 to 1163780 8857
Group Condition mRNA_485 mRNA_486 mRNA_487 mRNA_488 mRNA_489
8853
8854
8855
8856
8857
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -1.3      
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -1.3      
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.9      
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -1.0      
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.8      
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -1.0      
growth on ypd YPD 0.1 -0.4      
growth on ricinoleic acid YNB Glucose 0.2 -0.6      
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.4      
growth on oleic acid YNB Glucose 0.3 -0.3      
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1      
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.1      
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.4      
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.3      
growth on oleic acid YNB Oleic Acid 0.2 0.2      
ypd buoyancy 40 hrs High Buoyancy 0.0 0.5      
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.6      
auxotrophy YNB Glucose 0.1 0.7      
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.7      
auxotrophy YNB Glucose 75mM Arginine -0.3 1.3      
auxotrophy Dropout Complete -0.2 1.2      
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