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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_479: 8847 - K17302 COPB2, SEC27 coatomer subunit beta', at 1114132 to 1117214
8847
mRNA_480: 8848 - ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689, at 1117742 to 1121401
8848
mRNA_481: 8849 - K11756 RSC1_2 chromatin structure-remodeling complex subunit RSC1/2, at 1121651 to 1124733
8849
mRNA_482: 8850 - Hypothetical Protein, at 1146719 to 1146997
8850
mRNA_483: 8851 - KOG1339 Aspartyl protease, at 1150104 to 1151338
8851
Group
Condition
mRNA_479
mRNA_480
mRNA_481
mRNA_482
mRNA_483
8847
8848
8849
8850
8851
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.7
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.5
-0.2
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.2
-0.0
-0.8
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
-1.3
-0.2
-0.1
growth on ypd
YPD
0.1
-1.3
0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.1
0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.3
-0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.0
-0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.1
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
-0.0
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
-0.5
0.2
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.5
-0.7
0.2
0.0
auxotrophy
Dropout Complete
0.5
-0.6
0.0
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.4
-0.3
-0.1
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.6
0.3
1.0
growth on ricinoleic acid
YNB Glucose
-0.1
-0.3
0.2
0.7
auxotrophy
YNB Glucose
0.6
-0.4
0.1
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
-0.2
-0.0
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.1
0.1
0.8
growth on oleic acid
YNB Oleic Acid
0.2
0.1
0.5
0.1
growth on oleic acid
YNB Glucose
0.3
0.3
0.5
-0.1
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