Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_478: 8846 - HMMPfam-Tetratricopeptide repeat-PF07719,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1111046 to 1113487 8846 mRNA_479: 8847 - K17302 COPB2, SEC27 coatomer subunit beta', at 1114132 to 1117214 8847 mRNA_480: 8848 - ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689, at 1117742 to 1121401 8848 mRNA_481: 8849 - K11756 RSC1_2 chromatin structure-remodeling complex subunit RSC1/2, at 1121651 to 1124733 8849 mRNA_482: 8850 - Hypothetical Protein, at 1146719 to 1146997 8850
Group Condition mRNA_478 mRNA_479 mRNA_480 mRNA_481 mRNA_482
8846
8847
8848
8849
8850
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4   -0.4 -0.7 -0.2
growth on ypd YPD -0.2   0.1 -1.3 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0   0.4 -1.3 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2   -0.2 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3   0.2 -0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.2   -0.0 -0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1   -0.1 -0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.3   -0.3 -0.6 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.2   -0.2 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1   -0.4 -0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1   -0.1 0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0   0.5 -0.7 0.2
auxotrophy Dropout Complete 0.0   0.5 -0.6 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.3   0.0 -0.5 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2   -0.2 -0.1 0.1
auxotrophy YNB Glucose 75mM Arginine -0.0   0.4 -0.3 -0.1
growth on ricinoleic acid YNB Glucose 0.4   -0.1 -0.3 0.2
auxotrophy YNB Glucose 0.0   0.6 -0.4 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.3   0.5 -0.2 -0.0
growth on oleic acid YNB Oleic Acid 0.1   0.2 0.1 0.5
growth on oleic acid YNB Glucose 0.4   0.3 0.3 0.5
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