Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_476: 8844 - K02951 RP-S12e, RPS12 small subunit ribosomal protein S12e, at 1106447 to 1107237 8844 mRNA_477: 8845 - K10256 FAD2 omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase), at 1108768 to 1110470 8845 mRNA_478: 8846 - HMMPfam-Tetratricopeptide repeat-PF07719,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 1111046 to 1113487 8846 mRNA_479: 8847 - K17302 COPB2, SEC27 coatomer subunit beta', at 1114132 to 1117214 8847 mRNA_480: 8848 - ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689, at 1117742 to 1121401 8848
Group Condition mRNA_476 mRNA_477 mRNA_478 mRNA_479 mRNA_480
8844
8845
8846
8847
8848
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -0.4   -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy     -0.2   -0.2
ypd buoyancy 40 hrs High Buoyancy     -0.2   -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy     0.1   -0.4
ypd buoyancy 40 hrs Low Buoyancy     -0.1   -0.1
ypd buoyancy 40 hrs Median Buoyancy     -0.1   -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -0.3   0.2
growth on ypd YPD     -0.2   0.1
growth on ricinoleic acid YNB Ricinoleic Acid     0.3   -0.3
ypd buoyancy 40 hrs No Buoyancy Separation     0.2   -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid     0.2   -0.2
growth on ricinoleic acid YNB Glucose     0.4   -0.1
growth on oleic acid YNB Oleic Acid     0.1   0.2
facs on lipid accumulation Sorted High BODIPY Gate     0.3   0.0
facs on lipid accumulation Sorted Low BODIPY Gate     -0.0   0.4
auxotrophy YNB Glucose 75mM Arginine     -0.0   0.4
auxotrophy YNB Glucose 75mM Methionine     -0.0   0.5
auxotrophy Dropout Complete     0.0   0.5
growth on oleic acid YNB Glucose     0.4   0.3
auxotrophy YNB Glucose     0.0   0.6
facs on lipid accumulation Sorted No BODIPY Gate     0.3   0.5
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