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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_466: 8834 - Hypothetical Protein, at 1083366 to 1084523
8834
mRNA_467: 8835 - K07748 E1.1.1.170, NSDHL, ERG26 sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating), at 1084850 to 1086342
8835
mRNA_468: 8836 - Hypothetical Protein, at 1086424 to 1087519
8836
mRNA_469: 8837 - KOG1012 Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain, at 1088366 to 1093699
8837
mRNA_470: 8838 - KOG0714 Molecular chaperone (DnaJ superfamily), at 1094157 to 1095851
8838
Group
Condition
mRNA_466
mRNA_467
mRNA_468
mRNA_469
mRNA_470
8834
8835
8836
8837
8838
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.2
-1.5
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
0.5
-1.6
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.3
-0.4
-0.4
auxotrophy
YNB Glucose
-0.0
0.1
-1.4
0.1
auxotrophy
Dropout Complete
-0.0
0.2
-1.4
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.0
-1.5
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.2
-0.7
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
0.2
0.1
-0.9
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.3
-1.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.5
0.0
-0.3
growth on ricinoleic acid
YNB Glucose
0.0
0.3
-1.0
-0.1
growth on ypd
YPD
0.0
0.3
-0.9
-0.0
growth on oleic acid
YNB Oleic Acid
-0.2
0.5
-0.8
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.3
-0.3
0.5
growth on oleic acid
YNB Glucose
-0.2
0.4
-0.5
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.1
-0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.4
0.1
-0.5
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.0
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.1
-0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.4
-0.5
0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
0.3
0.9
0.5
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