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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_455: 8823 - KOG1745 Histones H3 and H4, at 1060190 to 1060901
8823
mRNA_456: 8824 - Hypothetical Protein, at 1062231 to 1064186
8824
mRNA_457: 8825 - K14963 WDR5, SWD3, CPS30 COMPASS component SWD3, at 1064648 to 1065964
8825
mRNA_458: 8826 - KOG2676 Uncharacterized conserved protein, at 1066274 to 1068450
8826
mRNA_459: 8827 - K10598 PPIL2, CYC4, CHP60 peptidyl-prolyl cis-trans isomerase-like 2, at 1068531 to 1071036
8827
Group
Condition
mRNA_455
mRNA_456
mRNA_457
mRNA_458
mRNA_459
8823
8824
8825
8826
8827
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.7
-0.3
-0.1
growth on ricinoleic acid
YNB Glucose
-0.3
-0.5
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
0.1
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.4
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
0.3
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
0.1
-0.2
growth on ypd
YPD
-0.1
-0.4
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.0
0.5
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.0
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.0
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.6
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.0
0.1
auxotrophy
Dropout Complete
0.1
0.4
-0.0
growth on oleic acid
YNB Oleic Acid
0.1
0.4
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.3
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.4
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.4
0.4
auxotrophy
YNB Glucose
0.5
0.2
0.1
growth on oleic acid
YNB Glucose
0.3
0.4
0.2
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