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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_444: 8812 - HMMPfam-Transcription factor IIIC subunit delta N-term-PF12657,HMMPfam-Putative zinc-finger of transcription factor IIIC complex-PF12660,SUPERFAMILY--SSF50978, at 1030821 to 1034414
8812
mRNA_445: 8813 - K03768 PPIB, ppiB peptidyl-prolyl cis-trans isomerase B (cyclophilin B), at 1034694 to 1036039
8813
mRNA_446: 8814 - K00254 DHODH, pyrD dihydroorotate dehydrogenase, at 1036896 to 1038649
8814
mRNA_447: 8815 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 1039972 to 1042565
8815
mRNA_448: 8816 - K20221 IPO4, RANBP4 importin-4, at 1043184 to 1046908
8816
Group
Condition
mRNA_444
mRNA_445
mRNA_446
mRNA_447
mRNA_448
8812
8813
8814
8815
8816
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.4
-1.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.0
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.1
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.3
-0.2
auxotrophy
Dropout Complete
-0.1
-0.4
0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.2
-0.2
growth on oleic acid
YNB Glucose
-0.2
0.0
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.1
0.0
growth on ricinoleic acid
YNB Glucose
0.3
-0.6
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
0.6
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.3
0.3
0.3
auxotrophy
YNB Glucose 75mM Arginine
0.5
-0.2
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.5
-0.1
auxotrophy
YNB Glucose
0.5
-0.3
0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
-0.2
0.5
growth on oleic acid
YNB Oleic Acid
0.2
0.1
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.7
-0.4
0.7
growth on ypd
YPD
0.5
0.6
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
0.9
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
0.1
1.1
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