Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_442: 8810 - K11835 USP4_11_15, UBP12 ubiquitin carboxyl-terminal hydrolase 4/11/15, at 1024579 to 1029147 8810 mRNA_443: 8811 - KOG2742 Predicted oxidoreductase, at 1029373 to 1030485 8811 mRNA_444: 8812 - HMMPfam-Transcription factor IIIC subunit delta N-term-PF12657,HMMPfam-Putative zinc-finger of transcription factor IIIC complex-PF12660,SUPERFAMILY--SSF50978, at 1030821 to 1034414 8812 mRNA_445: 8813 - K03768 PPIB, ppiB peptidyl-prolyl cis-trans isomerase B (cyclophilin B), at 1034694 to 1036039 8813 mRNA_446: 8814 - K00254 DHODH, pyrD dihydroorotate dehydrogenase, at 1036896 to 1038649 8814
Group Condition mRNA_442 mRNA_443 mRNA_444 mRNA_445 mRNA_446
8810
8811
8812
8813
8814
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.5 -0.1 -0.4  
facs on lipid accumulation Sorted No BODIPY Gate -0.7 0.4 -0.3 -0.0  
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 0.1 0.4 -0.2  
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.1 -0.3 -0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.2 0.0 0.2  
growth on oleic acid YNB Glucose 0.0 0.3 -0.2 0.0  
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.3 -0.2 0.3  
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.4 -0.1 0.2  
growth on oleic acid YNB Oleic Acid 0.1 0.1 0.2 0.1  
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.6 -0.3 0.3  
auxotrophy Dropout Complete 0.2 1.0 -0.1 -0.4  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 -0.3 0.0 0.6  
growth on ricinoleic acid YNB Glucose 0.2 1.0 0.3 -0.6  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 0.2 0.4 0.9  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 0.7 0.7 -0.4  
growth on ypd YPD 0.2 -0.2 0.5 0.6  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.5 0.3 0.5  
auxotrophy YNB Glucose 0.3 1.1 0.5 -0.3  
auxotrophy YNB Glucose 75mM Methionine 0.3 1.4 0.1 -0.1  
auxotrophy YNB Glucose 75mM Arginine 0.3 1.5 0.5 -0.2  
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 1.5 0.6 0.1  
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