Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_441: 8809 - K13989 DERL2_3 Derlin-2/3, at 1022824 to 1024299 8809 mRNA_442: 8810 - K11835 USP4_11_15, UBP12 ubiquitin carboxyl-terminal hydrolase 4/11/15, at 1024579 to 1029147 8810 mRNA_443: 8811 - KOG2742 Predicted oxidoreductase, at 1029373 to 1030485 8811 mRNA_444: 8812 - HMMPfam-Transcription factor IIIC subunit delta N-term-PF12657,HMMPfam-Putative zinc-finger of transcription factor IIIC complex-PF12660,SUPERFAMILY--SSF50978, at 1030821 to 1034414 8812 mRNA_445: 8813 - K03768 PPIB, ppiB peptidyl-prolyl cis-trans isomerase B (cyclophilin B), at 1034694 to 1036039 8813
Group Condition mRNA_441 mRNA_442 mRNA_443 mRNA_444 mRNA_445
8809
8810
8811
8812
8813
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 -1.0 0.1 0.4 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.7 0.0 -0.1 -0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 -0.0 -0.5 -0.1 -0.4
growth on oleic acid YNB Glucose -0.8 0.0 0.3 -0.2 0.0
growth on ricinoleic acid YNB Glucose -0.8 0.2 1.0 0.3 -0.6
auxotrophy Dropout Complete -0.6 0.2 1.0 -0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.0 0.4 -0.1 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.9 -0.7 0.4 -0.3 -0.0
growth on oleic acid YNB Oleic Acid -0.2 0.1 0.1 0.2 0.1
auxotrophy YNB Glucose 75mM Methionine -1.2 0.3 1.4 0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.0 0.6 -0.3 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.1 0.3 -0.2 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6 -0.3 0.2 0.0 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.0 0.7 0.7 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.5 -0.3 0.0 0.6
auxotrophy YNB Glucose -0.7 0.3 1.1 0.5 -0.3
auxotrophy YNB Glucose 75mM Arginine -1.0 0.3 1.5 0.5 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 0.2 1.5 0.6 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7 -0.4 0.2 0.4 0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 -0.0 0.5 0.3 0.5
growth on ypd YPD 1.9 0.2 -0.2 0.5 0.6
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