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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_417: 8785 - KOG4697 Integral membrane protein involved in transport between the late Golgi and endosome, at 973590 to 974560
8785
mRNA_418: 8786 - KOG2308 Phosphatidic acid-preferring phospholipase A1, contains DDHD domain, at 976232 to 979073
8786
mRNA_419: 8787 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 979163 to 981247
8787
mRNA_420: 8788 - K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase, at 981514 to 982786
8788
mRNA_421: 8789 - K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase, at 983035 to 984157
8789
Group
Condition
mRNA_417
mRNA_418
mRNA_419
mRNA_420
mRNA_421
8785
8786
8787
8788
8789
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
0.2
-0.0
0.1
-0.8
auxotrophy
Dropout Complete
-0.1
-0.0
-0.5
0.0
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.2
-0.1
0.4
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
0.1
-0.3
0.4
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.1
-0.3
-0.1
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.6
-0.1
-0.2
0.1
0.2
auxotrophy
YNB Glucose
-0.3
-0.1
-0.3
-0.2
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
0.1
-0.1
0.4
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.1
-0.0
-0.2
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.1
-0.1
-0.1
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.0
-0.0
-0.3
0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.1
-0.1
0.5
0.2
growth on ricinoleic acid
YNB Glucose
-0.7
-0.0
0.2
0.1
0.5
ypd buoyancy
40 hrs High Buoyancy
0.3
0.0
0.2
-0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.0
0.1
0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
0.0
0.3
-0.0
0.5
growth on oleic acid
YNB Glucose
-0.2
-0.3
0.2
0.3
0.3
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.1
0.3
0.1
-0.2
growth on ypd
YPD
0.1
-0.1
-0.3
0.7
0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.1
0.2
0.2
0.6
growth on oleic acid
YNB Oleic Acid
0.3
-0.1
0.1
0.3
0.6
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