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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_415: 8783 - K03511 POLK DNA polymerase kappa, at 969041 to 971775
8783
mRNA_416: 8784 - Hypothetical Protein, at 972046 to 973465
8784
mRNA_417: 8785 - KOG4697 Integral membrane protein involved in transport between the late Golgi and endosome, at 973590 to 974560
8785
mRNA_418: 8786 - KOG2308 Phosphatidic acid-preferring phospholipase A1, contains DDHD domain, at 976232 to 979073
8786
mRNA_419: 8787 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 979163 to 981247
8787
Group
Condition
mRNA_415
mRNA_416
mRNA_417
mRNA_418
mRNA_419
8783
8784
8785
8786
8787
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.2
-0.6
-0.1
-0.2
auxotrophy
Dropout Complete
-0.2
-0.1
-0.1
-0.0
-0.5
auxotrophy
YNB Glucose
-0.0
-0.1
-0.3
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.1
-0.6
0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.1
-0.4
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.1
-0.1
0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.3
-0.4
0.0
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.0
-0.6
0.1
-0.1
growth on ricinoleic acid
YNB Glucose
0.1
-0.1
-0.7
-0.0
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.2
-0.1
0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
0.2
-0.1
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.3
-0.5
-0.1
-0.1
growth on oleic acid
YNB Glucose
0.0
0.1
-0.2
-0.3
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
0.0
-0.4
0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
0.2
-0.1
-0.0
-0.0
growth on ypd
YPD
0.1
0.4
0.1
-0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.1
0.1
-0.0
0.1
growth on oleic acid
YNB Oleic Acid
-0.2
0.2
0.3
-0.1
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.1
0.2
0.1
0.3
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.0
0.3
0.0
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.4
0.1
0.1
0.2
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