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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_413: 8781 - K00227 SC5DL, ERG3 Delta7-sterol 5-desaturase, at 965870 to 967292
8781
mRNA_414: 8782 - KOG4170 2-enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/Peroxisomal 3-ketoacyl-CoA-thiolase, sterol-binding domain and related enzymes, at 967662 to 968667
8782
mRNA_415: 8783 - K03511 POLK DNA polymerase kappa, at 969041 to 971775
8783
mRNA_416: 8784 - Hypothetical Protein, at 972046 to 973465
8784
mRNA_417: 8785 - KOG4697 Integral membrane protein involved in transport between the late Golgi and endosome, at 973590 to 974560
8785
Group
Condition
mRNA_413
mRNA_414
mRNA_415
mRNA_416
mRNA_417
8781
8782
8783
8784
8785
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.2
-0.2
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.1
-0.3
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.0
0.0
-0.4
auxotrophy
Dropout Complete
-0.3
-0.2
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.0
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
0.1
-0.1
-0.7
auxotrophy
YNB Glucose
-0.2
-0.0
-0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.4
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.1
0.1
-0.6
growth on oleic acid
YNB Glucose
-0.2
0.0
0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.1
0.0
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.1
-0.1
-0.4
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
0.2
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
-0.1
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
0.1
0.3
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.0
0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.1
0.1
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.1
0.4
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.0
0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
0.2
-0.0
0.3
growth on ypd
YPD
0.2
0.1
0.4
0.1
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