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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_412: 8780 - Hypothetical Protein, at 965579 to 965773
8780
mRNA_413: 8781 - K00227 SC5DL, ERG3 Delta7-sterol 5-desaturase, at 965870 to 967292
8781
mRNA_414: 8782 - KOG4170 2-enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/Peroxisomal 3-ketoacyl-CoA-thiolase, sterol-binding domain and related enzymes, at 967662 to 968667
8782
mRNA_415: 8783 - K03511 POLK DNA polymerase kappa, at 969041 to 971775
8783
mRNA_416: 8784 - Hypothetical Protein, at 972046 to 973465
8784
Group
Condition
mRNA_412
mRNA_413
mRNA_414
mRNA_415
mRNA_416
8780
8781
8782
8783
8784
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.0
-0.2
auxotrophy
Dropout Complete
-0.3
-0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.4
-0.1
auxotrophy
YNB Glucose
-0.2
-0.0
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.0
0.0
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
0.2
growth on oleic acid
YNB Glucose
-0.2
0.0
0.1
growth on ricinoleic acid
YNB Glucose
-0.1
0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.1
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.1
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.1
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.0
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.1
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.0
0.2
growth on ypd
YPD
0.2
0.1
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
0.1
0.3
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