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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_410: 8778 - HMMPfam-WD domain, G-beta repeat-PF00400, at 960937 to 962253
8778
mRNA_411: 8779 - K12862 PLRG1, PRL1, PRP46 pleiotropic regulator 1, at 962864 to 964890
8779
mRNA_412: 8780 - Hypothetical Protein, at 965579 to 965773
8780
mRNA_413: 8781 - K00227 SC5DL, ERG3 Delta7-sterol 5-desaturase, at 965870 to 967292
8781
mRNA_414: 8782 - KOG4170 2-enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/Peroxisomal 3-ketoacyl-CoA-thiolase, sterol-binding domain and related enzymes, at 967662 to 968667
8782
Group
Condition
mRNA_410
mRNA_411
mRNA_412
mRNA_413
mRNA_414
8778
8779
8780
8781
8782
auxotrophy
YNB Glucose 75mM Arginine
-1.7
-0.4
auxotrophy
YNB Glucose
-1.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-1.0
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.6
auxotrophy
Dropout Complete
-0.5
-0.3
growth on oleic acid
YNB Glucose
-0.5
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.8
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.3
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
0.3
growth on oleic acid
YNB Oleic Acid
-0.0
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.5
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.3
growth on ypd
YPD
0.0
0.2
growth on ricinoleic acid
YNB Glucose
0.4
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
0.3
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