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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_406: 8774 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 944223 to 945484
8774
mRNA_407: 8775 - Hypothetical Protein, at 945583 to 946571
8775
mRNA_408: 8776 - Hypothetical Protein, at 947786 to 948268
8776
mRNA_409: 8777 - K00667 FAS2 fatty acid synthase subunit alpha, fungi type, at 950698 to 960325
8777
mRNA_410: 8778 - HMMPfam-WD domain, G-beta repeat-PF00400, at 960937 to 962253
8778
Group
Condition
mRNA_406
mRNA_407
mRNA_408
mRNA_409
mRNA_410
8774
8775
8776
8777
8778
ypd buoyancy
40 hrs Low Buoyancy
-1.8
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-1.1
0.0
-1.0
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.1
-1.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.9
-0.2
-0.8
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-1.0
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-1.7
-0.3
0.5
auxotrophy
YNB Glucose
-0.6
0.6
-1.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
0.1
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.2
-0.3
growth on ypd
YPD
-0.6
-0.3
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.5
0.2
auxotrophy
Dropout Complete
0.2
0.0
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.4
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
-0.7
0.2
growth on oleic acid
YNB Glucose
0.8
-0.4
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
0.4
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
1.1
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.7
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
1.0
0.7
-0.7
growth on oleic acid
YNB Oleic Acid
1.9
-0.5
-0.0
growth on ricinoleic acid
YNB Glucose
0.5
0.5
0.4
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