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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_405: 8773 - KOG4563 Cell cycle-regulated histone H1-binding protein, at 942527 to 943923
8773
mRNA_406: 8774 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 944223 to 945484
8774
mRNA_407: 8775 - Hypothetical Protein, at 945583 to 946571
8775
mRNA_408: 8776 - Hypothetical Protein, at 947786 to 948268
8776
mRNA_409: 8777 - K00667 FAS2 fatty acid synthase subunit alpha, fungi type, at 950698 to 960325
8777
Group
Condition
mRNA_405
mRNA_406
mRNA_407
mRNA_408
mRNA_409
8773
8774
8775
8776
8777
ypd buoyancy
40 hrs Low Buoyancy
-1.8
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-1.7
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-1.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.9
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-1.1
0.0
growth on ypd
YPD
-0.6
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
-0.7
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
0.4
auxotrophy
YNB Glucose
-0.6
0.6
auxotrophy
Dropout Complete
0.2
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.4
growth on oleic acid
YNB Glucose
0.8
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.7
growth on ricinoleic acid
YNB Glucose
0.5
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
1.1
growth on oleic acid
YNB Oleic Acid
1.9
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
1.0
0.7
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